Welcome to Shilei's Notebook!
=============================

.. figure:: Shilei-Logo.png

Hi! This notebook, *Shilei's Notebook*, is the ReadTheDocs companion to `Shilei's Homepage <https://wangsl97.github.io>`__.
It is intended for myself, my colleagues and friends in similar research fields.

.. note::

    Reading this book is easier with a slightly larger font size; I recommend using a zoom of 125%. You can do this on a Macintosh by holding down the ``Command`` key and pressing ``+``, or from the browser menu you can click on ``View -> Zoom In``.


.. toctree::
   :maxdepth: 1
   :caption: Common Piplines

   pipelines/Pipelines_overview
   pipelines/Structural_mri
   pipelines/Functional_mri
   pipelines/Multiecho-Functional_mri
   pipelines/ASL
   pipelines/DTI
   pipelines/QSM
   pipelines/MRS


.. toctree::
   :maxdepth: 1
   :caption: Packages for experiment design

   packages/eprime
   packages/psychotoolbox
   packages/psychopy
   packages/presentation


.. toctree::
   :maxdepth: 1
   :caption: Software for data analysis

   software/fsl
   software/afni
   software/spm
   software/freesurfer
   software/ants
   software/cat
   software/conn
   software/dpabi
   software/tedana
   software/LCmodel
   software/suspect
   software/qsmxt
   software/asltoolbox
   software/panda
   software/mrtrix
   software/brainnetview
   software/cpm
   software/mvpa
   software/rsa
   
   
.. toctree::
   :maxdepth: 1
   :caption: Current learning

   learning/R
   learning/Cantonese


.. toctree::
   :maxdepth: 1
   :caption: Work Support for CMRIR-SISU

   work_support/CMRIR-SISU/CMRIR-SISU
   work_support/CMRIR-SISU/Server_management/server_management


.. toctree::
   :maxdepth: 1
   :caption: Work Support for LSIC-HKBU

   work_support/LSIC-HKBU/LSIC-HKBU
   work_support/LSIC-HKBU/Data_download_copy/download_copy_data
   work_support/LSIC-HKBU/Server_management/server_management


.. toctree::
   :maxdepth: 1
   :caption: Useful tools

   useful_tools/Useful_tools